Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEP78395 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEP78395 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 AC069224.1-201ENST00000566372 1715 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEP78395 HAUS4P1-201ENST00000406739 1145 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 AC245100.5-201ENST00000452108 331 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 AC105233.2-201ENST00000523697 349 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 AF228730.5-201ENST00000530288 346 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEP78395 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRAMEP78395 MTDHP5-201ENST00000598980 586 ntBASIC16.28■□□□□ 0.2
PRAMEP78395 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEP78395 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEP78395 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEP78395 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEP78395 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEP78395 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEP78395 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEP78395 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEP78395 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEP78395 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEP78395 SPDYE11-202ENST00000450699 704 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEP78395 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEP78395 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEP78395 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEP78395 AL138918.1-201ENST00000568306 659 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 SPDYE9P-201ENST00000570642 692 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEP78395 AC027307.2-201ENST00000591252 911 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 AC073389.1-201ENST00000595595 795 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 SPDYE10P-202ENST00000612005 668 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 SPDYE8P-202ENST00000612377 668 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 C20orf181-201ENST00000623918 480 ntBASIC16.27■□□□□ 0.2
PRAMEP78395 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEP78395 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEP78395 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.27■□□□□ 0.19
PRAMEP78395 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEP78395 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.27■□□□□ 0.19
PRAMEP78395 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEP78395 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEP78395 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.27■□□□□ 0.19
PRAMEP78395 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEP78395 PRAL-201ENST00000624952 3286 ntBASIC16.27■□□□□ 0.19
PRAMEP78395 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms