Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 AC245100.5-201ENST00000452108 331 ntBASIC15.84■□□□□ 0.13
PKNOX1P55347 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 RNA5SP415-201ENST00000517246 115 ntBASIC15.84■□□□□ 0.13
PKNOX1P55347 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PKNOX1P55347 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PKNOX1P55347 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.84■□□□□ 0.13
PKNOX1P55347 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PKNOX1P55347 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 AL365330.1-201ENST00000607459 531 ntBASIC15.84■□□□□ 0.13
PKNOX1P55347 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 AC010507.1-201ENST00000633895 436 ntBASIC15.84■□□□□ 0.13
PKNOX1P55347 AC007064.4-201ENST00000637740 555 ntBASIC15.84■□□□□ 0.13
PKNOX1P55347 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.84■□□□□ 0.13
PKNOX1P55347 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PKNOX1P55347 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PKNOX1P55347 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PKNOX1P55347 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PKNOX1P55347 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.83■□□□□ 0.13
PKNOX1P55347 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.83■□□□□ 0.13
PKNOX1P55347 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.83■□□□□ 0.13
PKNOX1P55347 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PKNOX1P55347 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PKNOX1P55347 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PKNOX1P55347 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PKNOX1P55347 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
PKNOX1P55347 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PKNOX1P55347 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PKNOX1P55347 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PKNOX1P55347 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
PKNOX1P55347 HAUS4P1-201ENST00000406739 1145 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.83■□□□□ 0.12
PKNOX1P55347 AC092474.2-201ENST00000424288 719 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 AL450487.1-201ENST00000426799 995 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 IGHV3-22-201ENST00000520721 359 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.83■□□□□ 0.12
PKNOX1P55347 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.83■□□□□ 0.12
PKNOX1P55347 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 AP001005.1-201ENST00000571755 1248 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 AC023141.13-201ENST00000604991 943 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 AL078644.1-201ENST00000609881 752 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.83■□□□□ 0.12
PKNOX1P55347 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 AC023157.3-201ENST00000619086 2088 ntBASIC15.83■□□□□ 0.12
PKNOX1P55347 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
PKNOX1P55347 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PKNOX1P55347 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.83■□□□□ 0.12
PKNOX1P55347 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PKNOX1P55347 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PKNOX1P55347 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PKNOX1P55347 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PKNOX1P55347 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.82■□□□□ 0.12
PKNOX1P55347 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.82■□□□□ 0.12
PKNOX1P55347 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.82■□□□□ 0.12
PKNOX1P55347 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PKNOX1P55347 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PKNOX1P55347 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PKNOX1P55347 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms