Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC8P31273 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
HOXC8P31273 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC8P31273 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC8P31273 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC8P31273 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HOXC8P31273 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC8P31273 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 AC244669.2-201ENST00000612320 853 ntBASIC17.3■□□□□ 0.36
HOXC8P31273 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.3■□□□□ 0.36
HOXC8P31273 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HOXC8P31273 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC8P31273 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC8P31273 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC8P31273 MTHFR-217ENST00000641820 1569 ntBASIC17.29■□□□□ 0.36
HOXC8P31273 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 CNN2P8-201ENST00000421872 913 ntBASIC17.29■□□□□ 0.36
HOXC8P31273 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 AC016694.1-201ENST00000434179 700 ntBASIC17.29■□□□□ 0.36
HOXC8P31273 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC8P31273 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC8P31273 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HOXC8P31273 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC8P31273 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC8P31273 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC8P31273 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HOXC8P31273 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC8P31273 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms