Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FLJ38576-201ENST00000623820 2459 ntBASIC15.08■□□□□ 0
CCL4P13236 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.08■□□□□ 0
CCL4P13236 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 AC079328.2-201ENST00000561241 3354 ntBASIC15.08■□□□□ 0
CCL4P13236 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.08■□□□□ 0
CCL4P13236 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCL4P13236 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCL4P13236 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.07■□□□□ 0
CCL4P13236 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.07■□□□□ 0
CCL4P13236 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CCL4P13236 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.07■□□□□ 0
CCL4P13236 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.07■□□□□ 0
CCL4P13236 TOMM22P5-201ENST00000416399 439 ntBASIC15.07■□□□□ 0
CCL4P13236 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.07■□□□□ 0
CCL4P13236 BCRP2-202ENST00000447763 634 ntBASIC15.07■□□□□ 0
CCL4P13236 PHKG1P2-201ENST00000457537 863 ntBASIC15.07■□□□□ 0
CCL4P13236 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.07■□□□□ 0
CCL4P13236 BCRP6-201ENST00000510112 632 ntBASIC15.07■□□□□ 0
CCL4P13236 BCRP7-201ENST00000511549 544 ntBASIC15.07■□□□□ 0
CCL4P13236 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCL4P13236 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.07■□□□□ 0
CCL4P13236 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCL4P13236 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.07■□□□□ 0
CCL4P13236 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.07■□□□□ 0
CCL4P13236 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.07■□□□□ 0
CCL4P13236 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.07■□□□□ 0
CCL4P13236 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.07■□□□□ 0
CCL4P13236 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCL4P13236 AC093525.8-201ENST00000624099 1342 ntBASIC15.07■□□□□ 0
CCL4P13236 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCL4P13236 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CCL4P13236 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.07■□□□□ 0
CCL4P13236 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL4P13236 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCL4P13236 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.06■□□□□ 0
CCL4P13236 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCL4P13236 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.06■□□□□ 0
CCL4P13236 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.06■□□□□ 0
CCL4P13236 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 ME2P1-201ENST00000426028 1970 ntBASIC15.06■□□□□ 0
CCL4P13236 REXO1L1P-202ENST00000608646 1974 ntBASIC15.06■□□□□ 0
CCL4P13236 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 FAM86MP-201ENST00000340703 885 ntBASIC15.06■□□□□ 0
CCL4P13236 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.06■□□□□ 0
CCL4P13236 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.06■□□□□ 0
CCL4P13236 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.06■□□□□ 0
CCL4P13236 AC134915.1-201ENST00000426461 574 ntBASIC15.06■□□□□ 0
CCL4P13236 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CCL4P13236 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.06■□□□□ 0
CCL4P13236 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CCL4P13236 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.06■□□□□ 0
CCL4P13236 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.06■□□□□ 0
CCL4P13236 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.06■□□□□ 0
CCL4P13236 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.06■□□□□ 0
CCL4P13236 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.06■□□□□ 0
CCL4P13236 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.06■□□□□ 0
CCL4P13236 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.06■□□□□ 0
CCL4P13236 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.06■□□□□ 0
CCL4P13236 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCL4P13236 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms