Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 AC002056.1-201ENST00000395613 760 ntBASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 PRYP6-201ENST00000514804 343 ntBASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 AC112191.1-201ENST00000523689 701 ntBASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 FAM197Y3-203ENST00000618346 717 ntBASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV3-43DP0DP04 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 PMS2P7-201ENST00000506558 1336 ntBASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 AC099522.2-201ENST00000607001 744 ntBASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 AP005117.1-202ENST00000581724 1908 ntBASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV3-43DP0DP04 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV3-43DP0DP04 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms