Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 INE1-201ENST00000456273 945 ntBASIC23.44■■□□□ 1.34
HFM1A2PYH4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 AL359881.2-201ENST00000602973 570 ntBASIC23.44■■□□□ 1.34
HFM1A2PYH4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HFM1A2PYH4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC23.44■■□□□ 1.34
HFM1A2PYH4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 GAPDHP40-201ENST00000505218 1006 ntBASIC23.43■■□□□ 1.34
HFM1A2PYH4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 AL008721.1-201ENST00000609964 604 ntBASIC23.43■■□□□ 1.34
HFM1A2PYH4 MIR6752-201ENST00000618442 71 ntBASIC23.43■■□□□ 1.34
HFM1A2PYH4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
HFM1A2PYH4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HFM1A2PYH4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 TMEM14DP-201ENST00000422205 345 ntBASIC23.42■■□□□ 1.34
HFM1A2PYH4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HFM1A2PYH4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC23.42■■□□□ 1.34
HFM1A2PYH4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HFM1A2PYH4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 AL512384.1-201ENST00000406683 331 ntBASIC23.41■■□□□ 1.34
HFM1A2PYH4 U91328.1-201ENST00000437528 223 ntBASIC23.41■■□□□ 1.34
HFM1A2PYH4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 AC120045.2-201ENST00000567334 178 ntBASIC23.41■■□□□ 1.34
HFM1A2PYH4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
HFM1A2PYH4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms