Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 AC132938.2-201ENST00000579188 680 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 AL359881.2-201ENST00000602973 570 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 AC093726.1-201ENST00000608064 963 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 IGHV3-72-202ENST00000621503 303 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 AL591163.1-201ENST00000641757 987 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 KRT8P37-201ENST00000451609 1420 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRIT1Q9P2V4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 U91328.1-201ENST00000437528 223 ntBASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 RRP7BP-205ENST00000566851 833 ntBASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
LRIT1Q9P2V4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRIT1Q9P2V4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms