Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 RPL13P2-201ENST00000440687 659 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 TIMM17BP1-201ENST00000545713 516 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 AC106886.1-201ENST00000568660 600 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 WFDC1-204ENST00000613603 549 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 PCDHB19P-201ENST00000570871 2371 ntBASIC16.73■□□□□ 0.27
LRRC3Q9BY71 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC3Q9BY71 BNIP3P1-202ENST00000550043 1585 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC005052.1-201ENST00000625181 2492 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 GPR53P-205ENST00000457298 1084 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC243562.2-201ENST00000561247 970 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 CDC14C-201ENST00000428251 1719 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3Q9BY71 AC092171.3-201ENST00000610122 2651 ntBASIC16.72■□□□□ 0.27
LRRC3Q9BY71 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 IGHV3-71-201ENST00000523324 359 ntBASIC16.71■□□□□ 0.27
LRRC3Q9BY71 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 MIR6752-201ENST00000618442 71 ntBASIC16.71■□□□□ 0.27
LRRC3Q9BY71 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 ME2P1-201ENST00000426028 1970 ntBASIC16.71■□□□□ 0.27
LRRC3Q9BY71 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3Q9BY71 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC3Q9BY71 ALOX12P2-203ENST00000570921 1945 ntBASIC16.7■□□□□ 0.26
LRRC3Q9BY71 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms