Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AL592424.1-201ENST00000563624 1536 ntBASIC16.12■□□□□ 0.17
SIPA1Q96FS4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AL391005.1-201ENST00000623953 2435 ntBASIC16.11■□□□□ 0.17
SIPA1Q96FS4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 RN7SL837P-201ENST00000463010 287 ntBASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC104596.2-201ENST00000512793 793 ntBASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SIPA1Q96FS4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AC098850.1-201ENST00000419919 790 ntBASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AC245100.5-201ENST00000452108 331 ntBASIC16.1■□□□□ 0.17
SIPA1Q96FS4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 RARRES2P5-201ENST00000564013 466 ntBASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 AC017083.2-201ENST00000608069 979 ntBASIC16.1■□□□□ 0.17
SIPA1Q96FS4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIPA1Q96FS4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms