Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 KRT18P13-201ENST00000400056 1290 ntBASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 AC134407.2-201ENST00000625089 1978 ntBASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC65Q8IXS2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AC254562.1-201ENST00000417586 456 ntBASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 AC026979.3-201ENST00000607315 403 ntBASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC65Q8IXS2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 RPS8P6-201ENST00000426177 609 ntBASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 AL139010.1-201ENST00000454878 894 ntBASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC65Q8IXS2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 RBPMS2P1-201ENST00000437762 623 ntBASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 AP006288.1-201ENST00000446065 395 ntBASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 AC023141.5-201ENST00000458585 616 ntBASIC17.86■□□□□ 0.45
CCDC65Q8IXS2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms