Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KRT18P25-201ENST00000508931 1278 ntBASIC18.92■□□□□ 0.62
COL4A5P29400 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
COL4A5P29400 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.92■□□□□ 0.62
COL4A5P29400 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A5P29400 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.92■□□□□ 0.62
COL4A5P29400 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A5P29400 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
COL4A5P29400 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.92■□□□□ 0.62
COL4A5P29400 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A5P29400 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.92■□□□□ 0.62
COL4A5P29400 RPS2P36-201ENST00000456516 831 ntBASIC18.92■□□□□ 0.62
COL4A5P29400 AC044849.1-201ENST00000519737 1188 ntBASIC18.92■□□□□ 0.62
COL4A5P29400 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A5P29400 NDUFV2P1-201ENST00000596415 907 ntBASIC18.92■□□□□ 0.62
COL4A5P29400 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 AC148477.4-201ENST00000613430 1793 ntBASIC18.91■□□□□ 0.62
COL4A5P29400 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.91■□□□□ 0.62
COL4A5P29400 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 ALOX12P2-203ENST00000570921 1945 ntBASIC18.91■□□□□ 0.62
COL4A5P29400 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
COL4A5P29400 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL4A5P29400 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL4A5P29400 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A5P29400 AC104457.1-201ENST00000401024 814 ntBASIC18.91■□□□□ 0.62
COL4A5P29400 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL4A5P29400 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A5P29400 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.91■□□□□ 0.62
COL4A5P29400 SPCS2P2-201ENST00000603270 608 ntBASIC18.91■□□□□ 0.62
COL4A5P29400 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A5P29400 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A5P29400 AC128714.1-201ENST00000637035 887 ntBASIC18.91■□□□□ 0.62
COL4A5P29400 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A5P29400 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.9■□□□□ 0.62
COL4A5P29400 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.9■□□□□ 0.62
COL4A5P29400 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.9■□□□□ 0.62
COL4A5P29400 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
COL4A5P29400 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A5P29400 AC005730.2-201ENST00000564549 1184 ntBASIC18.9■□□□□ 0.62
COL4A5P29400 MIR5572-201ENST00000583188 137 ntBASIC18.9■□□□□ 0.62
COL4A5P29400 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A5P29400 AC132938.4-201ENST00000623835 848 ntBASIC18.9■□□□□ 0.62
COL4A5P29400 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A5P29400 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A5P29400 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
COL4A5P29400 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL4A5P29400 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL4A5P29400 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A5P29400 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.89■□□□□ 0.61
COL4A5P29400 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A5P29400 SPTLC1P5-201ENST00000450718 252 ntBASIC18.89■□□□□ 0.61
COL4A5P29400 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A5P29400 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.89■□□□□ 0.61
COL4A5P29400 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COL4A5P29400 AC092171.3-201ENST00000610122 2651 ntBASIC18.89■□□□□ 0.61
COL4A5P29400 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A5P29400 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A5P29400 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A5P29400 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A5P29400 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A5P29400 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms