Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC069120.2-201ENST00000524091 540 ntBASIC14.86□□□□□ -0.03
ABCD3P28288 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.86□□□□□ -0.03
ABCD3P28288 AC243562.2-201ENST00000561247 970 ntBASIC14.86□□□□□ -0.03
ABCD3P28288 AC027796.2-201ENST00000575326 344 ntBASIC14.86□□□□□ -0.03
ABCD3P28288 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ABCD3P28288 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 AL133215.2-201ENST00000609242 977 ntBASIC14.86□□□□□ -0.03
ABCD3P28288 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.86□□□□□ -0.03
ABCD3P28288 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ABCD3P28288 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ABCD3P28288 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ABCD3P28288 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.86□□□□□ -0.03
ABCD3P28288 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ABCD3P28288 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 CYP4F24P-201ENST00000586049 1580 ntBASIC14.85□□□□□ -0.03
ABCD3P28288 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCD3P28288 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCD3P28288 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCD3P28288 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCD3P28288 AP001282.1-201ENST00000531301 1499 ntBASIC14.85□□□□□ -0.03
ABCD3P28288 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCD3P28288 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCD3P28288 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.85□□□□□ -0.03
ABCD3P28288 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 DUX4L27-201ENST00000554796 1261 ntBASIC14.85□□□□□ -0.03
ABCD3P28288 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.85□□□□□ -0.03
ABCD3P28288 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.85□□□□□ -0.03
ABCD3P28288 AL589739.1-201ENST00000607720 493 ntBASIC14.85□□□□□ -0.03
ABCD3P28288 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.85□□□□□ -0.03
ABCD3P28288 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ABCD3P28288 AL513523.2-202ENST00000427283 2040 ntBASIC14.85□□□□□ -0.03
ABCD3P28288 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ABCD3P28288 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ABCD3P28288 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.84□□□□□ -0.03
ABCD3P28288 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.84□□□□□ -0.03
ABCD3P28288 CETN4P-206ENST00000642099 2168 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 AC092850.2-201ENST00000623821 2697 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
ABCD3P28288 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 AC004987.2-201ENST00000395959 1148 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 MIR943-201ENST00000401286 94 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.84□□□□□ -0.03
ABCD3P28288 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.84□□□□□ -0.03
ABCD3P28288 AL158211.3-201ENST00000607385 239 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.84□□□□□ -0.03
ABCD3P28288 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ABCD3P28288 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ABCD3P28288 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCD3P28288 AC134407.2-201ENST00000625089 1978 ntBASIC14.84□□□□□ -0.03
ABCD3P28288 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCD3P28288 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCD3P28288 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ABCD3P28288 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ABCD3P28288 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms