Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPRFP10586 AP003171.2-201ENST00000528208 925 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPRFP10586 FLJ38576-201ENST00000623820 2459 ntBASIC18.13■□□□□ 0.49
PTPRFP10586 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.13■□□□□ 0.49
PTPRFP10586 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 AC018892.3-201ENST00000623986 2499 ntBASIC18.12■□□□□ 0.49
PTPRFP10586 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PTPRFP10586 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPRFP10586 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 MIR648-201ENST00000385046 94 ntBASIC18.12■□□□□ 0.49
PTPRFP10586 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PTPRFP10586 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPRFP10586 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPRFP10586 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPRFP10586 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTPRFP10586 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPRFP10586 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPRFP10586 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPRFP10586 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPRFP10586 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPRFP10586 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PTPRFP10586 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PTPRFP10586 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 GAPDHP40-201ENST00000505218 1006 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 AC084346.2-201ENST00000607097 949 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 MTHFR-217ENST00000641820 1569 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 LTB4R2-202ENST00000528054 3092 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 MIR663B-201ENST00000408361 115 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 HSPB1P2-201ENST00000448722 546 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPRFP10586 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPRFP10586 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPRFP10586 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPRFP10586 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPRFP10586 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPRFP10586 AL021578.1-201ENST00000613646 709 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 AC145423.3-201ENST00000615987 467 ntBASIC18.11■□□□□ 0.49
PTPRFP10586 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTPRFP10586 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPRFP10586 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPRFP10586 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPRFP10586 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.1■□□□□ 0.49
PTPRFP10586 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPRFP10586 KRT8P13-201ENST00000463294 1010 ntBASIC18.1■□□□□ 0.49
PTPRFP10586 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPRFP10586 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPRFP10586 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPRFP10586 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
PTPRFP10586 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPRFP10586 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPRFP10586 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms