Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC6P09630 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXC6P09630 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXC6P09630 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC6P09630 AC120045.2-201ENST00000567334 178 ntBASIC18.04■□□□□ 0.48
HOXC6P09630 CLUHP6-201ENST00000580789 941 ntBASIC18.04■□□□□ 0.48
HOXC6P09630 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC6P09630 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 BRWD1P1-201ENST00000401091 371 ntBASIC18.03■□□□□ 0.48
HOXC6P09630 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC6P09630 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC6P09630 AC007551.1-201ENST00000457394 519 ntBASIC18.03■□□□□ 0.48
HOXC6P09630 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC6P09630 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC6P09630 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 HLA-A-202ENST00000376806 1854 ntBASIC18.03■□□□□ 0.48
HOXC6P09630 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC6P09630 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HOXC6P09630 FLJ38576-201ENST00000623820 2459 ntBASIC18.03■□□□□ 0.48
HOXC6P09630 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC6P09630 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 AC020916.1-201ENST00000587762 1774 ntBASIC18.02■□□□□ 0.48
HOXC6P09630 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC6P09630 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC6P09630 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 BAATP1-201ENST00000412284 1225 ntBASIC18.02■□□□□ 0.48
HOXC6P09630 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC6P09630 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC6P09630 AL355864.2-201ENST00000447420 863 ntBASIC18.02■□□□□ 0.48
HOXC6P09630 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.02■□□□□ 0.48
HOXC6P09630 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HOXC6P09630 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.02■□□□□ 0.48
HOXC6P09630 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC6P09630 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC6P09630 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
HOXC6P09630 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC6P09630 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
HOXC6P09630 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC6P09630 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC6P09630 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.02■□□□□ 0.47
HOXC6P09630 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.02■□□□□ 0.47
HOXC6P09630 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC6P09630 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC6P09630 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms