Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 AC093520.2-201ENST00000561830 333 ntBASIC15.93■□□□□ 0.14
CAPN1P07384 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 AC093028.1-201ENST00000622998 982 ntBASIC15.93■□□□□ 0.14
CAPN1P07384 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.93■□□□□ 0.14
CAPN1P07384 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 AL592424.1-201ENST00000563624 1536 ntBASIC15.93■□□□□ 0.14
CAPN1P07384 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CAPN1P07384 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 HYMAI-201ENST00000635591 3347 ntBASIC15.93■□□□□ 0.14
CAPN1P07384 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.92■□□□□ 0.14
CAPN1P07384 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CAPN1P07384 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.92■□□□□ 0.14
CAPN1P07384 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 CDC14C-201ENST00000428251 1719 ntBASIC15.92■□□□□ 0.14
CAPN1P07384 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CAPN1P07384 AL671277.1-201ENST00000429656 993 ntBASIC15.92■□□□□ 0.14
CAPN1P07384 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CAPN1P07384 HLA-J-203ENST00000494367 1087 ntBASIC15.92■□□□□ 0.14
CAPN1P07384 KRT8P48-201ENST00000515599 1220 ntBASIC15.92■□□□□ 0.14
CAPN1P07384 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.92■□□□□ 0.14
CAPN1P07384 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 AC026120.1-201ENST00000611536 926 ntBASIC15.92■□□□□ 0.14
CAPN1P07384 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.92■□□□□ 0.14
CAPN1P07384 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CAPN1P07384 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 LINC02447-202ENST00000501888 2146 ntBASIC15.91■□□□□ 0.14
CAPN1P07384 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CAPN1P07384 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN1P07384 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN1P07384 PMS2P4-201ENST00000412466 1052 ntBASIC15.91■□□□□ 0.14
CAPN1P07384 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN1P07384 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.91■□□□□ 0.14
CAPN1P07384 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms