Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 AP001282.1-201ENST00000531301 1499 ntBASIC13.59□□□□□ -0.23
CD74P04233 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 AC005332.1-201ENST00000577698 1310 ntBASIC13.59□□□□□ -0.23
CD74P04233 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.58□□□□□ -0.23
CD74P04233 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CD74P04233 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.58□□□□□ -0.23
CD74P04233 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
CD74P04233 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD74P04233 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD74P04233 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.58□□□□□ -0.24
CD74P04233 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.58□□□□□ -0.24
CD74P04233 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CD74P04233 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.58□□□□□ -0.24
CD74P04233 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.58□□□□□ -0.24
CD74P04233 KRT18P21-201ENST00000515767 1272 ntBASIC13.58□□□□□ -0.24
CD74P04233 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.58□□□□□ -0.24
CD74P04233 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.58□□□□□ -0.24
CD74P04233 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.58□□□□□ -0.24
CD74P04233 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CD74P04233 AL365330.1-201ENST00000607459 531 ntBASIC13.58□□□□□ -0.24
CD74P04233 AC021097.1-201ENST00000607902 574 ntBASIC13.58□□□□□ -0.24
CD74P04233 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CD74P04233 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.58□□□□□ -0.24
CD74P04233 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD74P04233 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CD74P04233 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CD74P04233 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD74P04233 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.58□□□□□ -0.24
CD74P04233 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 FGD5P1-202ENST00000614866 2498 ntBASIC13.57□□□□□ -0.24
CD74P04233 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.57□□□□□ -0.24
CD74P04233 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 AC093724.1-201ENST00000448659 1027 ntBASIC13.57□□□□□ -0.24
CD74P04233 AC132008.2-207ENST00000454517 770 ntBASIC13.57□□□□□ -0.24
CD74P04233 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.57□□□□□ -0.24
CD74P04233 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 AC091076.1-201ENST00000610741 619 ntBASIC13.57□□□□□ -0.24
CD74P04233 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.57□□□□□ -0.24
CD74P04233 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD74P04233 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.57□□□□□ -0.24
CD74P04233 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 AC012569.1-201ENST00000591191 1524 ntBASIC13.57□□□□□ -0.24
CD74P04233 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.57□□□□□ -0.24
CD74P04233 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.57□□□□□ -0.24
CD74P04233 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD74P04233 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms