Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL1Q9NSC2 AC079328.2-201ENST00000561241 3354 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 U91328.1-201ENST00000437528 223 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TARDBPP1-201ENST00000442013 1203 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AC244107.1-201ENST00000442033 332 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 MYCLP2-201ENST00000449268 967 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 INE1-201ENST00000456273 945 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 CTBP2P3-201ENST00000585629 1255 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TMEM261P1-201ENST00000604899 340 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 AL596087.1-201ENST00000400979 1969 ntBASIC19.28■□□□□ 0.68
SALL1Q9NSC2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL1Q9NSC2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL1Q9NSC2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SALL1Q9NSC2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AL512384.1-201ENST00000406683 331 ntBASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 RN7SL752P-201ENST00000463779 287 ntBASIC19.26■□□□□ 0.67
SALL1Q9NSC2 GIMAP3P-201ENST00000495150 836 ntBASIC19.26■□□□□ 0.67
SALL1Q9NSC2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AL158212.4-201ENST00000624062 1286 ntBASIC19.26■□□□□ 0.67
SALL1Q9NSC2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AC006449.6-201ENST00000612330 2296 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms