Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.01■□□□□ 0.95
NBPF4Q96M43 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF4Q96M43 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NBPF4Q96M43 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21■□□□□ 0.95
NBPF4Q96M43 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21■□□□□ 0.95
NBPF4Q96M43 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21■□□□□ 0.95
NBPF4Q96M43 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21■□□□□ 0.95
NBPF4Q96M43 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21■□□□□ 0.95
NBPF4Q96M43 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21■□□□□ 0.95
NBPF4Q96M43 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21■□□□□ 0.95
NBPF4Q96M43 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NBPF4Q96M43 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NBPF4Q96M43 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21■□□□□ 0.95
NBPF4Q96M43 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF4Q96M43 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 AC018892.3-201ENST00000623986 2499 ntBASIC20.99■□□□□ 0.95
NBPF4Q96M43 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 SOCS2P1-201ENST00000417727 557 ntBASIC20.99■□□□□ 0.95
NBPF4Q96M43 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 AC005252.2-201ENST00000624630 1141 ntBASIC20.99■□□□□ 0.95
NBPF4Q96M43 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF4Q96M43 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF4Q96M43 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF4Q96M43 C1QBPP1-201ENST00000400117 770 ntBASIC20.98■□□□□ 0.95
NBPF4Q96M43 RPL7P3-201ENST00000441388 714 ntBASIC20.98■□□□□ 0.95
NBPF4Q96M43 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 PTP4A1P2-201ENST00000546033 454 ntBASIC20.98■□□□□ 0.95
NBPF4Q96M43 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF4Q96M43 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms