Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KDM1BQ8NB78 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KDM1BQ8NB78 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.46■□□□□ 0.23
KDM1BQ8NB78 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.46■□□□□ 0.23
KDM1BQ8NB78 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KDM1BQ8NB78 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KDM1BQ8NB78 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
KDM1BQ8NB78 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KDM1BQ8NB78 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KDM1BQ8NB78 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 PAUPAR-201ENST00000630360 2965 ntBASIC16.45■□□□□ 0.22
KDM1BQ8NB78 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AC245100.5-201ENST00000452108 331 ntBASIC16.45■□□□□ 0.22
KDM1BQ8NB78 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KDM1BQ8NB78 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AC009407.1-201ENST00000568958 598 ntBASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 AL592424.1-201ENST00000563624 1536 ntBASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KDM1BQ8NB78 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KDM1BQ8NB78 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms