Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.86■■□□□ 1.09
XRN1Q8IZH2 AC132938.4-201ENST00000623835 848 ntBASIC21.86■■□□□ 1.09
XRN1Q8IZH2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 AC073413.1-201ENST00000603927 732 ntBASIC21.85■■□□□ 1.09
XRN1Q8IZH2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRN1Q8IZH2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 AC104457.1-201ENST00000401024 814 ntBASIC21.84■■□□□ 1.09
XRN1Q8IZH2 FNTAP2-201ENST00000430308 634 ntBASIC21.84■■□□□ 1.09
XRN1Q8IZH2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 RN7SL574P-201ENST00000581512 297 ntBASIC21.84■■□□□ 1.09
XRN1Q8IZH2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.84■■□□□ 1.09
XRN1Q8IZH2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 AC148477.4-201ENST00000613430 1793 ntBASIC21.84■■□□□ 1.09
XRN1Q8IZH2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRN1Q8IZH2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 SERPINA13P-202ENST00000478994 924 ntBASIC21.83■■□□□ 1.09
XRN1Q8IZH2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 RN7SL48P-201ENST00000579283 293 ntBASIC21.83■■□□□ 1.09
XRN1Q8IZH2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRN1Q8IZH2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.83■■□□□ 1.08
XRN1Q8IZH2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 SPCS2P2-201ENST00000603270 608 ntBASIC21.83■■□□□ 1.08
XRN1Q8IZH2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
XRN1Q8IZH2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 AC022217.1-201ENST00000521069 738 ntBASIC21.82■■□□□ 1.08
XRN1Q8IZH2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 AC128714.1-201ENST00000637035 887 ntBASIC21.82■■□□□ 1.08
XRN1Q8IZH2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRN1Q8IZH2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms