Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 AL691432.1-201ENST00000596308 1422 ntBASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CU639417.3-201ENST00000624240 1404 ntBASIC17.93■□□□□ 0.46
TRIM50Q86XT4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PCDHA12-202ENST00000613593 2588 ntBASIC17.93■□□□□ 0.46
TRIM50Q86XT4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM50Q86XT4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AZGP1P1-201ENST00000411909 902 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 KRT17P7-201ENST00000451704 1104 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC055876.2-201ENST00000531834 546 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AC074044.1-201ENST00000609673 707 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 IGHV3-72-202ENST00000621503 303 ntBASIC17.92■□□□□ 0.46
TRIM50Q86XT4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM50Q86XT4 AL391825.1-201ENST00000457671 1364 ntBASIC17.91■□□□□ 0.46
TRIM50Q86XT4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AC099398.1-201ENST00000567919 2776 ntBASIC17.91■□□□□ 0.46
TRIM50Q86XT4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms