Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 AC087499.6-201ENST00000411576 835 ntBASIC20■□□□□ 0.79
UBE3BQ7Z3V4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 NME4-207ENST00000450036 985 ntTSL 3 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 REXO1L1P-202ENST00000608646 1974 ntBASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 TARDBPP1-201ENST00000442013 1203 ntBASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE3BQ7Z3V4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 TIMM17BP1-201ENST00000545713 516 ntBASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE3BQ7Z3V4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 AL596087.1-201ENST00000400979 1969 ntBASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE3BQ7Z3V4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms