Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 BTBD7P1-201ENST00000447253 1453 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 AC243562.2-201ENST00000561247 970 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 AC006449.6-201ENST00000612330 2296 ntBASIC19.73■□□□□ 0.75
ATP2B3Q16720 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP2B3Q16720 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP2B3Q16720 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC004987.2-201ENST00000395959 1148 ntBASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AC004233.3-201ENST00000607794 1269 ntBASIC19.72■□□□□ 0.75
ATP2B3Q16720 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATP2B3Q16720 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP2B3Q16720 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC015922.1-201ENST00000421102 1152 ntBASIC19.71■□□□□ 0.75
ATP2B3Q16720 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2B3Q16720 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms