Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
COL16A1Q07092 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.16■□□□□ 0.98
COL16A1Q07092 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.16■□□□□ 0.98
COL16A1Q07092 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 AC010234.1-201ENST00000494599 870 ntBASIC21.16■□□□□ 0.98
COL16A1Q07092 AC100850.1-201ENST00000506768 649 ntBASIC21.16■□□□□ 0.98
COL16A1Q07092 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
COL16A1Q07092 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.16■□□□□ 0.98
COL16A1Q07092 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.16■□□□□ 0.98
COL16A1Q07092 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 AC067852.2-201ENST00000590513 2313 ntBASIC21.16■□□□□ 0.98
COL16A1Q07092 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 AL138799.1-201ENST00000448213 1675 ntBASIC21.16■□□□□ 0.98
COL16A1Q07092 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
COL16A1Q07092 AC009053.2-201ENST00000563701 2365 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 TPM3P8-201ENST00000330554 643 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.15■□□□□ 0.98
COL16A1Q07092 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.15■□□□□ 0.98
COL16A1Q07092 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.15■□□□□ 0.98
COL16A1Q07092 AL391280.1-201ENST00000506969 1062 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.15■□□□□ 0.98
COL16A1Q07092 RTN3P1-201ENST00000536295 711 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.15■□□□□ 0.98
COL16A1Q07092 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL16A1Q07092 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 AL139008.1-201ENST00000437894 228 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.15■□□□□ 0.98
COL16A1Q07092 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL16A1Q07092 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.15■□□□□ 0.98
COL16A1Q07092 AL023803.2-201ENST00000620080 638 ntBASIC21.15■□□□□ 0.98
COL16A1Q07092 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.14■□□□□ 0.98
COL16A1Q07092 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL16A1Q07092 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.14■□□□□ 0.98
COL16A1Q07092 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.14■□□□□ 0.98
COL16A1Q07092 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL16A1Q07092 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL16A1Q07092 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.14■□□□□ 0.97
COL16A1Q07092 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.14■□□□□ 0.97
COL16A1Q07092 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.14■□□□□ 0.97
COL16A1Q07092 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.14■□□□□ 0.97
COL16A1Q07092 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COL16A1Q07092 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 POM121L8P-201ENST00000417732 1281 ntBASIC21.14■□□□□ 0.97
COL16A1Q07092 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 POM121L9P-203ENST00000441984 1285 ntBASIC21.14■□□□□ 0.97
COL16A1Q07092 AC006335.1-201ENST00000445200 547 ntBASIC21.14■□□□□ 0.97
COL16A1Q07092 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
COL16A1Q07092 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.14■□□□□ 0.97
COL16A1Q07092 AC127024.7-201ENST00000625101 200 ntBASIC21.14■□□□□ 0.97
COL16A1Q07092 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL16A1Q07092 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
COL16A1Q07092 KRT8P29-201ENST00000420409 1371 ntBASIC21.14■□□□□ 0.97
COL16A1Q07092 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COL16A1Q07092 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL16A1Q07092 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
COL16A1Q07092 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL16A1Q07092 GHSR-202ENST00000427970 912 ntBASIC21.13■□□□□ 0.97
COL16A1Q07092 CHMP1AP1-201ENST00000445563 662 ntBASIC21.13■□□□□ 0.97
COL16A1Q07092 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL16A1Q07092 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.13■□□□□ 0.97
COL16A1Q07092 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms