Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.65■□□□□ 0.1
PDX1P52945 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PDX1P52945 AC098614.1-201ENST00000368528 745 ntBASIC15.65■□□□□ 0.1
PDX1P52945 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PDX1P52945 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.65■□□□□ 0.1
PDX1P52945 INE1-201ENST00000456273 945 ntBASIC15.65■□□□□ 0.1
PDX1P52945 DOC2GP-202ENST00000514950 1163 ntBASIC15.65■□□□□ 0.1
PDX1P52945 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
PDX1P52945 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.65■□□□□ 0.1
PDX1P52945 AC061975.2-201ENST00000581722 295 ntBASIC15.65■□□□□ 0.1
PDX1P52945 MIR6752-201ENST00000618442 71 ntBASIC15.65■□□□□ 0.1
PDX1P52945 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 AL662844.4-201ENST00000606367 2838 ntBASIC15.65■□□□□ 0.1
PDX1P52945 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 AL512652.2-201ENST00000625156 1716 ntBASIC15.65■□□□□ 0.1
PDX1P52945 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PDX1P52945 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDX1P52945 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
PDX1P52945 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PDX1P52945 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 SPDYE19P-201ENST00000338590 713 ntBASIC15.64■□□□□ 0.09
PDX1P52945 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
PDX1P52945 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 GIMAP3P-201ENST00000495150 836 ntBASIC15.64■□□□□ 0.09
PDX1P52945 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PDX1P52945 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 HILS1-202ENST00000545329 423 ntBASIC15.64■□□□□ 0.09
PDX1P52945 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.64■□□□□ 0.09
PDX1P52945 CHCHD2P3-201ENST00000603038 451 ntBASIC15.64■□□□□ 0.09
PDX1P52945 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 AC008494.3-201ENST00000606615 944 ntBASIC15.64■□□□□ 0.09
PDX1P52945 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.64■□□□□ 0.09
PDX1P52945 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDX1P52945 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PDX1P52945 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PDX1P52945 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDX1P52945 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 AL391825.1-201ENST00000457671 1364 ntBASIC15.63■□□□□ 0.09
PDX1P52945 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDX1P52945 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.63■□□□□ 0.09
PDX1P52945 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms