Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.76■□□□□ 0.43
GPC3P51654 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 AC239800.4-201ENST00000603712 296 ntBASIC17.76■□□□□ 0.43
GPC3P51654 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 AC004790.1-201ENST00000612686 536 ntBASIC17.76■□□□□ 0.43
GPC3P51654 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GPC3P51654 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC3P51654 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GPC3P51654 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 AC026691.1-201ENST00000602502 2017 ntBASIC17.76■□□□□ 0.43
GPC3P51654 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 AC006449.6-201ENST00000612330 2296 ntBASIC17.75■□□□□ 0.43
GPC3P51654 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
GPC3P51654 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GPC3P51654 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GPC3P51654 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.75■□□□□ 0.43
GPC3P51654 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 SPDYE18-201ENST00000510091 1050 ntBASIC17.75■□□□□ 0.43
GPC3P51654 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.75■□□□□ 0.43
GPC3P51654 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 AC012645.4-201ENST00000610691 1061 ntBASIC17.75■□□□□ 0.43
GPC3P51654 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.75■□□□□ 0.43
GPC3P51654 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
GPC3P51654 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GPC3P51654 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GPC3P51654 AL391005.1-201ENST00000623953 2435 ntBASIC17.74■□□□□ 0.43
GPC3P51654 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 TNRC18P3-201ENST00000441896 2691 ntBASIC17.74■□□□□ 0.43
GPC3P51654 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 AC114501.2-201ENST00000439631 535 ntBASIC17.74■□□□□ 0.43
GPC3P51654 GNAQP1-201ENST00000444815 1067 ntBASIC17.74■□□□□ 0.43
GPC3P51654 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC3P51654 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC3P51654 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC3P51654 AL132655.2-201ENST00000596276 594 ntBASIC17.74■□□□□ 0.43
GPC3P51654 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 MIR6069-201ENST00000620069 79 ntBASIC17.74■□□□□ 0.43
GPC3P51654 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 AC025048.6-201ENST00000634326 1161 ntBASIC17.74■□□□□ 0.43
GPC3P51654 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC3P51654 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC3P51654 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC3P51654 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC3P51654 AL596087.1-201ENST00000400979 1969 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms