Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A2P43004 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A2P43004 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A2P43004 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC1A2P43004 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
SLC1A2P43004 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC1A2P43004 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 CICP13-201ENST00000422015 2789 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC1A2P43004 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A2P43004 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A2P43004 KRT8P48-201ENST00000515599 1220 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A2P43004 AC243562.1-201ENST00000560672 389 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A2P43004 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC1A2P43004 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A2P43004 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 AC073347.1-201ENST00000421633 2643 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 AC092850.2-201ENST00000623821 2697 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.08■□□□□ 0.16
SLC1A2P43004 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A2P43004 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A2P43004 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A2P43004 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A2P43004 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 AC104640.1-201ENST00000562617 2109 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 SPCS2P4-201ENST00000436160 681 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 SPDYE11-202ENST00000450699 704 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A2P43004 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A2P43004 SPDYE9P-201ENST00000570642 692 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A2P43004 SPDYE10P-202ENST00000612005 668 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 SPDYE8P-202ENST00000612377 668 ntBASIC16.07■□□□□ 0.16
SLC1A2P43004 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC1A2P43004 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A2P43004 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A2P43004 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A2P43004 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 AC126177.1-201ENST00000547829 2218 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms