Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.73■□□□□ 0.75
TM4SF1P30408 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.72■□□□□ 0.75
TM4SF1P30408 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TM4SF1P30408 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 AC004898.1-201ENST00000451057 766 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 BX284668.4-201ENST00000453917 508 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.72■□□□□ 0.75
TM4SF1P30408 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 AP001582.1-201ENST00000525856 295 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.72■□□□□ 0.75
TM4SF1P30408 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 AP006547.1-201ENST00000563435 692 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.72■□□□□ 0.75
TM4SF1P30408 MIR4741-201ENST00000579822 90 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.72■□□□□ 0.75
TM4SF1P30408 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TM4SF1P30408 AP005019.2-201ENST00000615104 511 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.72■□□□□ 0.75
TM4SF1P30408 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.72■□□□□ 0.75
TM4SF1P30408 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.72■□□□□ 0.75
TM4SF1P30408 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF1P30408 AC138028.6-201ENST00000616106 1482 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 AHCYP2-201ENST00000430630 1300 ntBASIC19.72■□□□□ 0.75
TM4SF1P30408 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
TM4SF1P30408 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.71■□□□□ 0.75
TM4SF1P30408 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TM4SF1P30408 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.71■□□□□ 0.75
TM4SF1P30408 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
TM4SF1P30408 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.71■□□□□ 0.75
TM4SF1P30408 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TM4SF1P30408 RPSAP36-202ENST00000494591 1261 ntBASIC19.71■□□□□ 0.75
TM4SF1P30408 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.71■□□□□ 0.75
TM4SF1P30408 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF1P30408 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF1P30408 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF1P30408 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.7■□□□□ 0.74
TM4SF1P30408 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF1P30408 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms