Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 UBALD1-205ENST00000590891 2641 ntBASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 CROCCP1-201ENST00000426910 5675 ntBASIC21.2■□□□□ 0.98
CSB-PGBD3P0DP91 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 BNIP3P1-202ENST00000550043 1585 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 PFN1P12-201ENST00000455938 534 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 VDAC1P7-201ENST00000462417 847 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AP000812.2-201ENST00000538934 718 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AC120045.2-201ENST00000567334 178 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AC103810.3-201ENST00000583567 96 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 AC010328.2-201ENST00000597698 1111 ntBASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSB-PGBD3P0DP91 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 BAATP1-201ENST00000412284 1225 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 YBX1P6-201ENST00000442962 1002 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 POU5F1P6-201ENST00000466990 990 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AC009486.1-201ENST00000569860 813 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 CLUHP6-201ENST00000580789 941 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AC243960.2-201ENST00000600996 747 ntBASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CSB-PGBD3P0DP91 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 AC009542.2-202ENST00000619004 1067 ntBASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 AC134312.5-201ENST00000568031 1313 ntBASIC21.17■□□□□ 0.98
CSB-PGBD3P0DP91 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms