Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.55□□□□□ -0.08
SPTA1P02549 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 C2orf27AP3-201ENST00000434123 579 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.55□□□□□ -0.08
SPTA1P02549 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 AL354718.3-201ENST00000616414 581 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 CR382287.1-201ENST00000623954 586 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 SNX33P1-201ENST00000592116 1762 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.55□□□□□ -0.08
SPTA1P02549 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.55□□□□□ -0.08
SPTA1P02549 MAGEA5-201ENST00000446757 942 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 UPF3AP2-201ENST00000457924 1132 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 AC093433.1-201ENST00000458048 571 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.55□□□□□ -0.08
SPTA1P02549 AP001889.1-201ENST00000525414 633 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.55□□□□□ -0.08
SPTA1P02549 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 AC104982.3-201ENST00000581995 514 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 AC138951.2-201ENST00000623455 1161 ntBASIC14.55□□□□□ -0.08
SPTA1P02549 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SPTA1P02549 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.55□□□□□ -0.08
SPTA1P02549 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SPTA1P02549 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTA1P02549 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.54□□□□□ -0.08
SPTA1P02549 AP001063.1-201ENST00000568332 529 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.54□□□□□ -0.08
SPTA1P02549 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 AL158212.4-201ENST00000624062 1286 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 AC092053.1-201ENST00000605787 1936 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 AL136982.4-201ENST00000437689 1740 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.54□□□□□ -0.08
SPTA1P02549 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 AC135050.7-201ENST00000624508 2218 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SPTA1P02549 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.54□□□□□ -0.08
SPTA1P02549 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTA1P02549 AL607033.1-201ENST00000623900 1599 ntBASIC14.54□□□□□ -0.08
SPTA1P02549 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPTA1P02549 AL031731.1-201ENST00000642131 2094 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPTA1P02549 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
SPTA1P02549 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPTA1P02549 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPTA1P02549 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.53□□□□□ -0.08
SPTA1P02549 TOMM22P5-201ENST00000416399 439 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 RPL13P2-201ENST00000440687 659 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 AKR7A2P1-201ENST00000460134 915 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.53□□□□□ -0.08
SPTA1P02549 AC124283.3-201ENST00000570869 594 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 NDUFV2P1-201ENST00000596415 907 ntBASIC14.53□□□□□ -0.08
SPTA1P02549 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms