Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC52A3Q9NQ40 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC52A3Q9NQ40 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC52A3Q9NQ40 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC52A3Q9NQ40 AGAP7P-201ENST00000582299 2062 ntBASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 AGAP14-201ENST00000624701 2060 ntBASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC52A3Q9NQ40 AL691432.1-201ENST00000596308 1422 ntBASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AC098831.1-202ENST00000438821 336 ntBASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 BNIP3P1-202ENST00000550043 1585 ntBASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC52A3Q9NQ40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC026396.1-201ENST00000419388 421 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC079781.3-201ENST00000449110 356 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PRYP6-201ENST00000514804 343 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC061975.2-201ENST00000581722 295 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 FOXO1B-201ENST00000504678 1527 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 AC126365.1-201ENST00000578585 1514 ntBASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC52A3Q9NQ40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms