Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC135178.5-201ENST00000602597 674 ntBASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 AC090506.2-201ENST00000624521 419 ntBASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SCAF1Q9H7N4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 PI4KAP1-204ENST00000612579 1703 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AC132938.5-201ENST00000624980 1813 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 MRPS18AP1-201ENST00000414458 589 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 OR2X1P-201ENST00000421144 687 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 ACA64.2-201ENST00000459014 129 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 HAUS1P1-201ENST00000505275 832 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AC026150.2-201ENST00000564693 1156 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AP000280.1-201ENST00000624800 832 ntBASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC24.3■■□□□ 1.48
SCAF1Q9H7N4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SPDYE7P-202ENST00000420373 878 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 RN7SL589P-201ENST00000481268 310 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC004890.2-204ENST00000481968 304 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC082651.2-201ENST00000496833 166 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 MIR6080-201ENST00000617359 66 ntBASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SCAF1Q9H7N4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC138969.3-201ENST00000546612 1459 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC138932.2-201ENST00000548268 1459 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 AC126755.4-201ENST00000549796 1459 ntBASIC24.28■■□□□ 1.48
SCAF1Q9H7N4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms