Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF541Q9H0D2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AC245100.5-201ENST00000452108 331 ntBASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 LDHBP1-201ENST00000455730 1119 ntBASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 IMP3P2-201ENST00000489760 475 ntBASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AL451050.2-201ENST00000606967 682 ntBASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF541Q9H0D2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 HNRNPUP1-201ENST00000554987 333 ntBASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 MIR3619-201ENST00000579667 83 ntBASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 AC145423.3-201ENST00000615987 467 ntBASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF541Q9H0D2 AC015818.8-201ENST00000587907 1519 ntBASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 RPS2P36-201ENST00000456516 831 ntBASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 SPCS2P2-201ENST00000603270 608 ntBASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ZNF541Q9H0D2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF541Q9H0D2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF541Q9H0D2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF541Q9H0D2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms