Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AL353705.2-201ENST00000428243 662 ntBASIC17.22■□□□□ 0.35
LMO3Q8TAP4 PHKG1P2-201ENST00000457537 863 ntBASIC17.22■□□□□ 0.35
LMO3Q8TAP4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 MIR4453-201ENST00000584019 89 ntBASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 AC105250.1-201ENST00000509378 2057 ntBASIC17.22■□□□□ 0.35
LMO3Q8TAP4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.22■□□□□ 0.35
LMO3Q8TAP4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 AC109322.1-201ENST00000524499 1264 ntBASIC17.21■□□□□ 0.35
LMO3Q8TAP4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 RN7SL828P-201ENST00000607615 303 ntBASIC17.21■□□□□ 0.35
LMO3Q8TAP4 AL596442.2-201ENST00000610240 980 ntBASIC17.21■□□□□ 0.35
LMO3Q8TAP4 AC003101.2-201ENST00000612557 442 ntBASIC17.21■□□□□ 0.35
LMO3Q8TAP4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMO3Q8TAP4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LMO3Q8TAP4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LMO3Q8TAP4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LMO3Q8TAP4 SSR4P1-203ENST00000599569 2260 ntBASIC17.21■□□□□ 0.34
LMO3Q8TAP4 AC009090.5-201ENST00000624886 2285 ntBASIC17.21■□□□□ 0.34
LMO3Q8TAP4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC126177.1-201ENST00000547829 2218 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC013268.4-201ENST00000637413 2228 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC092127.1-201ENST00000567093 3455 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 PPT1-215ENST00000641471 2368 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AZGP1P1-201ENST00000411909 902 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 HNRNPUP1-201ENST00000554987 333 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 AL450472.2-201ENST00000603663 1156 ntBASIC17.2■□□□□ 0.34
LMO3Q8TAP4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LMO3Q8TAP4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms