Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAM1L1Q8N609 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AC093214.1-201ENST00000511688 1107 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AL391005.1-201ENST00000623953 2435 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AC087499.5-201ENST00000452760 1342 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 LINC02447-202ENST00000501888 2146 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AL603832.2-201ENST00000566195 2125 ntBASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAM1L1Q8N609 AC026691.1-201ENST00000602502 2017 ntBASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 MIR6069-201ENST00000620069 79 ntBASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAM1L1Q8N609 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms