Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 AL590787.1-201ENST00000568856 1315 ntBASIC15.28■□□□□ 0.04
LPCAT4Q643R3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 AL020989.1-201ENST00000422979 469 ntBASIC15.28■□□□□ 0.04
LPCAT4Q643R3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PMPCAP1-201ENST00000508114 1576 ntBASIC15.28■□□□□ 0.04
LPCAT4Q643R3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPCAT4Q643R3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 AC009090.5-201ENST00000624886 2285 ntBASIC15.27■□□□□ 0.04
LPCAT4Q643R3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.27■□□□□ 0.04
LPCAT4Q643R3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 COX11P1-201ENST00000489116 835 ntBASIC15.27■□□□□ 0.04
LPCAT4Q643R3 AL592071.1-201ENST00000611956 408 ntBASIC15.27■□□□□ 0.04
LPCAT4Q643R3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.27■□□□□ 0.04
LPCAT4Q643R3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 AC006504.5-208ENST00000588784 2401 ntBASIC15.27■□□□□ 0.03
LPCAT4Q643R3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.27■□□□□ 0.03
LPCAT4Q643R3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 AC131009.4-201ENST00000624048 1740 ntBASIC15.26■□□□□ 0.03
LPCAT4Q643R3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LPCAT4Q643R3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms