Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 POM121L10P-201ENST00000436994 1285 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AL627389.1-201ENST00000413508 1182 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AC080080.1-201ENST00000625121 2420 ntBASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13DQ5THJ4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC104982.3-201ENST00000581995 514 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AL451050.2-201ENST00000606967 682 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 LDHBP1-201ENST00000455730 1119 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 RN7SL720P-201ENST00000488178 304 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PRSS30P-206ENST00000641773 873 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CD8B2-202ENST00000417670 633 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 MIR3907-201ENST00000579424 151 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 MIR5572-201ENST00000583188 137 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC015818.8-201ENST00000587907 1519 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AL590640.2-201ENST00000457038 527 ntBASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13DQ5THJ4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms