Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AC109322.1-201ENST00000524499 1264 ntBASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AP001160.2-201ENST00000596071 487 ntBASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 AL353705.2-201ENST00000428243 662 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 AL139010.1-201ENST00000454878 894 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 AC105021.1-202ENST00000570572 669 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 MIR6080-201ENST00000617359 66 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 LINC00628-201ENST00000628516 1289 ntBASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN20Q4JDL3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN20Q4JDL3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN20Q4JDL3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN20Q4JDL3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 TSEN15P1-201ENST00000423257 515 ntBASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 HLA-J-203ENST00000494367 1087 ntBASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AC003101.2-201ENST00000612557 442 ntBASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AC018892.3-201ENST00000623986 2499 ntBASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN20Q4JDL3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms