Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 TERF1P1-201ENST00000311003 1181 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 PMPCAP1-201ENST00000508114 1576 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 VENTXP5-201ENST00000523979 775 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 AC010327.5-201ENST00000586923 3061 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 AL590787.1-201ENST00000568856 1315 ntBASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC6LQ2NKX8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC009090.5-201ENST00000624886 2285 ntBASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AL020989.1-201ENST00000422979 469 ntBASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 COX11P1-201ENST00000489116 835 ntBASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC124864.1-201ENST00000623408 392 ntBASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC126755.1-201ENST00000525846 6405 ntBASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC6LQ2NKX8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 AC005521.1-201ENST00000393351 872 ntBASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 BX664615.1-201ENST00000443558 458 ntBASIC17.15■□□□□ 0.34
ERCC6LQ2NKX8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms