Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPS4XP62701 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPS4XP62701 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.59□□□□□ -0.07
RPS4XP62701 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.59□□□□□ -0.07
RPS4XP62701 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPS4XP62701 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RPS4XP62701 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RPS4XP62701 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.59□□□□□ -0.07
RPS4XP62701 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPS4XP62701 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RPS4XP62701 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.58□□□□□ -0.07
RPS4XP62701 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
RPS4XP62701 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPS4XP62701 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPS4XP62701 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RPS4XP62701 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RPS4XP62701 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RPS4XP62701 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RPS4XP62701 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
RPS4XP62701 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RPS4XP62701 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 MIR770-201ENST00000390219 98 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.58□□□□□ -0.08
RPS4XP62701 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.58□□□□□ -0.08
RPS4XP62701 RARRES2P8-201ENST00000566335 367 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.58□□□□□ -0.08
RPS4XP62701 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.58□□□□□ -0.08
RPS4XP62701 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 AC092364.2-202ENST00000597012 1073 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.58□□□□□ -0.08
RPS4XP62701 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 AC105339.1-204ENST00000636249 355 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RPS4XP62701 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.58□□□□□ -0.08
RPS4XP62701 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 AC126177.1-201ENST00000547829 2218 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.58□□□□□ -0.08
RPS4XP62701 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RPS4XP62701 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.58□□□□□ -0.08
RPS4XP62701 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RPS4XP62701 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RPS4XP62701 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.57□□□□□ -0.08
RPS4XP62701 AC004461.1-201ENST00000412461 403 ntBASIC14.57□□□□□ -0.08
RPS4XP62701 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.57□□□□□ -0.08
RPS4XP62701 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RPS4XP62701 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
RPS4XP62701 AC025678.2-201ENST00000562061 970 ntBASIC14.57□□□□□ -0.08
RPS4XP62701 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RPS4XP62701 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.57□□□□□ -0.08
RPS4XP62701 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms