Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC3P19447 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ERCC3P19447 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 AL391825.1-201ENST00000457671 1364 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 KRT8P12-202ENST00000472924 1397 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ERCC3P19447 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC3P19447 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.69■□□□□ 0.58
ERCC3P19447 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.69■□□□□ 0.58
ERCC3P19447 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
ERCC3P19447 ARSEP1-201ENST00000420443 635 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.69■□□□□ 0.58
ERCC3P19447 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 AC114501.2-201ENST00000439631 535 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 SERBP1P3-201ENST00000459980 809 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ERCC3P19447 AL033527.5-202ENST00000641632 1098 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 AL118508.1-201ENST00000613502 2345 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.69■□□□□ 0.58
ERCC3P19447 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC3P19447 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
ERCC3P19447 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ERCC3P19447 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ERCC3P19447 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.68■□□□□ 0.58
ERCC3P19447 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 SPDYE17-201ENST00000412399 783 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
ERCC3P19447 ATP5G2P4-201ENST00000442175 420 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.68■□□□□ 0.58
ERCC3P19447 INE1-201ENST00000456273 945 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 AC093004.1-201ENST00000508850 424 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.68■□□□□ 0.58
ERCC3P19447 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 WASH4P-201ENST00000564273 1246 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 AC008494.3-201ENST00000606615 944 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 AC026979.3-201ENST00000607315 403 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ERCC3P19447 IGHV3-72-202ENST00000621503 303 ntBASIC18.68■□□□□ 0.58
ERCC3P19447 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC3P19447 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC3P19447 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC3P19447 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms