Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 AC009093.7-201ENST00000623853 1223 ntBASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 Z92544.3-201ENST00000624747 417 ntBASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 AP3S2-216ENST00000617003 1561 ntBASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 GK-202ENST00000378941 458 ntTSL 3 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 FAM86GP-201ENST00000448322 971 ntBASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 RNA5SP410-201ENST00000516285 106 ntBASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CUEDC1Q9NWM3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 FAM220BP-201ENST00000377689 816 ntBASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 ALG1L8P-201ENST00000533887 760 ntBASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CUEDC1Q9NWM3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms