Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AP005901.3-202ENST00000581653 237 ntBASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC073869.1-201ENST00000415574 2762 ntBASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 FDX1P1-201ENST00000449115 551 ntBASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC009533.2-201ENST00000543664 586 ntBASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC114341.1-201ENST00000618070 349 ntBASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AC006486.2-201ENST00000624246 2199 ntBASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms