Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AC027796.2-201ENST00000575326 344 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AC020765.3-201ENST00000613051 740 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 UXT-AS1-201ENST00000590504 1525 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
UPK3BQ9BT76 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.33□□□□□ -0.59
UPK3BQ9BT76 SNX33P1-201ENST00000592116 1762 ntBASIC11.33□□□□□ -0.59
UPK3BQ9BT76 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 FAM86GP-201ENST00000448322 971 ntBASIC11.33□□□□□ -0.6
UPK3BQ9BT76 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AC093028.1-201ENST00000622998 982 ntBASIC11.33□□□□□ -0.6
UPK3BQ9BT76 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UPK3BQ9BT76 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms