Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 GK-202ENST00000378941 458 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 CU634019.7-201ENST00000624153 1185 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AC005252.2-201ENST00000624630 1141 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 FP236241.2-201ENST00000624906 1185 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 KRT223P-202ENST00000449164 1292 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AL033527.4-201ENST00000641026 673 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AL033527.5-201ENST00000641382 801 ntBASIC18.71■□□□□ 0.59
CDK5RAP2Q96SN8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 LINC02447-202ENST00000501888 2146 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 AC104596.2-201ENST00000512793 793 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 MIR4313-201ENST00000580760 101 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 AC244669.2-201ENST00000612320 853 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 MIR6752-201ENST00000618442 71 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 AC018695.7-201ENST00000624587 2492 ntBASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP2Q96SN8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 RN7SL752P-201ENST00000463779 287 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 AC106760.1-201ENST00000508690 800 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 TIMM17BP1-201ENST00000545713 516 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 MIR6805-201ENST00000615055 62 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 PDIA3P1-201ENST00000471856 1510 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 AC112504.1-201ENST00000623415 1841 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 RAB43P1-201ENST00000561790 589 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms