Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC239868.1-201ENST00000369385 493 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 OLA1P2-201ENST00000395519 1264 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AL391280.1-201ENST00000506969 1062 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC006483.2-201ENST00000609813 515 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 MED25-209ENST00000612791 881 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CYP4F24P-201ENST00000586049 1580 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC074338.1-201ENST00000416825 156 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 GOLGA2P7-209ENST00000560408 745 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 KRT8P21-201ENST00000430398 1491 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 BAK1P1-201ENST00000317045 636 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 KRT8P30-201ENST00000432100 650 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AC020904.3-201ENST00000624199 442 ntBASIC4.77□□□□□ -1.65
HMCN1Q96RW7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMCN1Q96RW7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 FAM8A4P-201ENST00000435433 1213 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 GAPDHP40-201ENST00000505218 1006 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AL157813.1-201ENST00000612996 587 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ENPP7P14-201ENST00000621765 1040 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms