Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 OR8S1-201ENST00000310194 1080 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AC087499.6-201ENST00000411576 835 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 U91328.1-201ENST00000437528 223 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 RN7SL752P-201ENST00000463779 287 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 CTBP2P3-201ENST00000585629 1255 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 AL691432.1-201ENST00000596308 1422 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 AZGP1P1-201ENST00000411909 902 ntBASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 AP006294.1-201ENST00000415407 339 ntBASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 LINC01115-203ENST00000606068 577 ntBASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC85AQ96PX6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 MYCLP2-201ENST00000449268 967 ntBASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 AC055876.2-201ENST00000531834 546 ntBASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 MIR8072-201ENST00000614241 80 ntBASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85AQ96PX6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 AL391825.1-201ENST00000457671 1364 ntBASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC85AQ96PX6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms