Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC092364.2-201ENST00000596710 2692 ntBASIC14.35□□□□□ -0.11
APH1AQ96BI3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APH1AQ96BI3 AC068587.6-202ENST00000641839 5619 ntBASIC14.35□□□□□ -0.11
APH1AQ96BI3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APH1AQ96BI3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.34□□□□□ -0.11
APH1AQ96BI3 CYMP-203ENST00000474680 1263 ntBASIC14.34□□□□□ -0.11
APH1AQ96BI3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 AC140878.1-201ENST00000565277 250 ntBASIC14.34□□□□□ -0.11
APH1AQ96BI3 AC105021.1-202ENST00000570572 669 ntBASIC14.34□□□□□ -0.11
APH1AQ96BI3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 AC093512.1-201ENST00000617969 520 ntBASIC14.34□□□□□ -0.11
APH1AQ96BI3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APH1AQ96BI3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APH1AQ96BI3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
APH1AQ96BI3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.33□□□□□ -0.11
APH1AQ96BI3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APH1AQ96BI3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 MTND6P24-201ENST00000440466 518 ntBASIC14.33□□□□□ -0.12
APH1AQ96BI3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 AL139010.1-201ENST00000454878 894 ntBASIC14.33□□□□□ -0.12
APH1AQ96BI3 AC069120.2-201ENST00000524091 540 ntBASIC14.33□□□□□ -0.12
APH1AQ96BI3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APH1AQ96BI3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.33□□□□□ -0.12
APH1AQ96BI3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms