Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AC138951.2-201ENST00000623455 1161 ntBASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 FLJ38576-201ENST00000623820 2459 ntBASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 AC018892.3-201ENST00000623986 2499 ntBASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL27A1Q8IZC6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC006449.6-201ENST00000612330 2296 ntBASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC091804.1-201ENST00000486888 567 ntBASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC009486.1-201ENST00000569860 813 ntBASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AL021578.1-201ENST00000613646 709 ntBASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 AC145423.3-201ENST00000615987 467 ntBASIC14.89□□□□□ -0.03
COL27A1Q8IZC6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AC006001.1-201ENST00000325130 474 ntBASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms