Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC004233.3-201ENST00000607794 1269 ntBASIC19.42■□□□□ 0.7
RFX7Q2KHR2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 PCDHA1-201ENST00000378133 2726 ntBASIC19.42■□□□□ 0.7
RFX7Q2KHR2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX7Q2KHR2 KRT8P12-202ENST00000472924 1397 ntBASIC19.42■□□□□ 0.7
RFX7Q2KHR2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.41■□□□□ 0.7
RFX7Q2KHR2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.41■□□□□ 0.7
RFX7Q2KHR2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.4■□□□□ 0.7
RFX7Q2KHR2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.4■□□□□ 0.7
RFX7Q2KHR2 AC114501.2-201ENST00000439631 535 ntBASIC19.4■□□□□ 0.7
RFX7Q2KHR2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 WASH4P-201ENST00000564273 1246 ntBASIC19.4■□□□□ 0.7
RFX7Q2KHR2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFX7Q2KHR2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
RFX7Q2KHR2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 NME2P1-201ENST00000426182 414 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AC135586.1-201ENST00000539323 574 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 CR383656.12-201ENST00000549567 513 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 TP53TG3HP-202ENST00000569755 579 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AC140912.1-201ENST00000577171 1054 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RFX7Q2KHR2 AL358472.5-202ENST00000641448 1267 ntBASIC19.39■□□□□ 0.69
RFX7Q2KHR2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms